multi-core FindAllMarkers()

multi-core FindAllMarkers()

mcFindAllMarkers(seu, do.flatten = TRUE, only.pos = TRUE, n.cores = 10, ...)

Arguments

seu

Seurat object

do.flatten

Flattern the marker list into data.frame. Default: TRUE

only.pos

Only positive markers. Default: TRUE

n.cores

The number of threads. Default: 10

...

Arguments passed to Seurat::FindMarkers()

Value

data.frame or list contains putative markers.

References

https://gist.github.com/diazdc/1735102c243cd16acb1b1f3fd09a26e1